Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99248.1 | AKJ00302.1 | AA314_00875 | AA314_01928 | Endonuclease/exonuclease/phosphatase family protein. | Cysteine desulfurase. | 0.445 |
AKI99755.1 | AKJ00302.1 | AA314_01382 | AA314_01928 | Cysteine desulfurase. | Cysteine desulfurase. | 0.539 |
AKI99755.1 | AKJ00767.1 | AA314_01382 | AA314_02393 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein SufB. | 0.872 |
AKI99755.1 | AKJ00768.1 | AA314_01382 | AA314_02394 | Cysteine desulfurase. | Iron-sulfur cluster assembly ATPase protein SufC. | 0.900 |
AKI99755.1 | AKJ00769.1 | AA314_01382 | AA314_02395 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein SufD. | 0.862 |
AKI99755.1 | AKJ00771.1 | AA314_01382 | AA314_02397 | Cysteine desulfurase. | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | 0.884 |
AKI99755.1 | AKJ02199.1 | AA314_01382 | AA314_03825 | Cysteine desulfurase. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.714 |
AKJ00300.1 | AKJ00301.1 | AA314_01926 | AA314_01927 | Isoquinoline 1-oxidoreductase alpha subunit. | Hypothetical protein. | 0.499 |
AKJ00300.1 | AKJ00302.1 | AA314_01926 | AA314_01928 | Isoquinoline 1-oxidoreductase alpha subunit. | Cysteine desulfurase. | 0.515 |
AKJ00301.1 | AKJ00300.1 | AA314_01927 | AA314_01926 | Hypothetical protein. | Isoquinoline 1-oxidoreductase alpha subunit. | 0.499 |
AKJ00301.1 | AKJ00302.1 | AA314_01927 | AA314_01928 | Hypothetical protein. | Cysteine desulfurase. | 0.505 |
AKJ00302.1 | AKI99248.1 | AA314_01928 | AA314_00875 | Cysteine desulfurase. | Endonuclease/exonuclease/phosphatase family protein. | 0.445 |
AKJ00302.1 | AKI99755.1 | AA314_01928 | AA314_01382 | Cysteine desulfurase. | Cysteine desulfurase. | 0.539 |
AKJ00302.1 | AKJ00300.1 | AA314_01928 | AA314_01926 | Cysteine desulfurase. | Isoquinoline 1-oxidoreductase alpha subunit. | 0.515 |
AKJ00302.1 | AKJ00301.1 | AA314_01928 | AA314_01927 | Cysteine desulfurase. | Hypothetical protein. | 0.505 |
AKJ00302.1 | AKJ00767.1 | AA314_01928 | AA314_02393 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein SufB. | 0.632 |
AKJ00302.1 | AKJ00768.1 | AA314_01928 | AA314_02394 | Cysteine desulfurase. | Iron-sulfur cluster assembly ATPase protein SufC. | 0.726 |
AKJ00302.1 | AKJ00769.1 | AA314_01928 | AA314_02395 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein SufD. | 0.673 |
AKJ00302.1 | AKJ00771.1 | AA314_01928 | AA314_02397 | Cysteine desulfurase. | Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. | 0.765 |
AKJ00302.1 | AKJ02199.1 | AA314_01928 | AA314_03825 | Cysteine desulfurase. | Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.714 |
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