STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00312.1High-affnity carbon uptake protein Hat/HatR. (2279 aa)    
Predicted Functional Partners:
AKI99006.1
TPR repeat protein.
 
 
 0.813
AKJ01185.1
DNA recombination protein RmuC.
 
 
 0.788
AKJ00058.1
WD domain G-beta repeat protein.
 
   
 0.773
AKJ01005.1
DNA recombination protein RmuC.
 
 
 0.760
AKJ06284.1
TPR repeat protein.
 
 
 0.754
AKI99978.1
Trans-aconitate 2-methyltransferase.
 
     0.726
AKJ02525.1
Hypothetical protein.
  
   
 0.723
AKI99753.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
  
     0.701
AKJ02027.1
Hypothetical protein.
  
   
 0.695
AKJ02530.1
Carbon monoxide oxidation accessory protein CoxG.
  
     0.689
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.