STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00320.1TPR repeat protein. (395 aa)    
Predicted Functional Partners:
AKJ02405.1
TPR repeat protein.
 
     0.736
AKJ04918.1
TPR domain protein, putative component of TonB system.
  
     0.730
AKJ05797.1
TPR repeat protein.
  
     0.730
AKJ02757.1
TPR domain protein, putative component of TonB system.
  
     0.720
AKJ03134.1
Tetratricopeptide repeat protein.
 
     0.720
AKJ02311.1
TPR repeat protein.
  
     0.710
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
     0.709
AKJ08293.1
TPR repeat protein.
  
     0.704
AKI99740.1
Hypothetical protein.
  
     0.685
AKJ04298.1
Tetratricopeptide repeat family.
  
     0.674
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.