Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99249.1 | AKJ00328.1 | AA314_00876 | AA314_01954 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine-D-alanine ligase. | 0.915 |
AKI99249.1 | murC | AA314_00876 | AA314_08007 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.505 |
AKI99249.1 | murD | AA314_00876 | AA314_08010 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.765 |
AKI99249.1 | murF | AA314_00876 | AA314_08012 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.944 |
AKJ00328.1 | AKI99249.1 | AA314_01954 | AA314_00876 | D-alanine-D-alanine ligase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.915 |
AKJ00328.1 | AKJ00329.1 | AA314_01954 | AA314_01955 | D-alanine-D-alanine ligase. | Hypothetical protein. | 0.727 |
AKJ00328.1 | AKJ00330.1 | AA314_01954 | AA314_01956 | D-alanine-D-alanine ligase. | Hypothetical protein. | 0.599 |
AKJ00328.1 | AKJ06990.1 | AA314_01954 | AA314_08616 | D-alanine-D-alanine ligase. | Histone acetyltransferase HPA2. | 0.643 |
AKJ00328.1 | ftsA | AA314_01954 | AA314_08003 | D-alanine-D-alanine ligase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.671 |
AKJ00328.1 | ftsQ | AA314_01954 | AA314_08004 | D-alanine-D-alanine ligase. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.671 |
AKJ00328.1 | murC | AA314_01954 | AA314_08007 | D-alanine-D-alanine ligase. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.671 |
AKJ00328.1 | murD | AA314_01954 | AA314_08010 | D-alanine-D-alanine ligase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.594 |
AKJ00328.1 | murF | AA314_01954 | AA314_08012 | D-alanine-D-alanine ligase. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.952 |
AKJ00328.1 | murG | AA314_01954 | AA314_08008 | D-alanine-D-alanine ligase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.613 |
AKJ00329.1 | AKJ00328.1 | AA314_01955 | AA314_01954 | Hypothetical protein. | D-alanine-D-alanine ligase. | 0.727 |
AKJ00329.1 | AKJ00330.1 | AA314_01955 | AA314_01956 | Hypothetical protein. | Hypothetical protein. | 0.628 |
AKJ00330.1 | AKJ00328.1 | AA314_01956 | AA314_01954 | Hypothetical protein. | D-alanine-D-alanine ligase. | 0.599 |
AKJ00330.1 | AKJ00329.1 | AA314_01956 | AA314_01955 | Hypothetical protein. | Hypothetical protein. | 0.628 |
AKJ06990.1 | AKJ00328.1 | AA314_08616 | AA314_01954 | Histone acetyltransferase HPA2. | D-alanine-D-alanine ligase. | 0.643 |
ftsA | AKJ00328.1 | AA314_08003 | AA314_01954 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | D-alanine-D-alanine ligase. | 0.671 |
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