STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00330.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
AKJ05395.1
Nickel transporter UreH.
  
     0.765
AKJ03653.1
HAD superfamily.
  
     0.731
AKJ08245.1
HAD superfamily.
  
     0.713
AKJ03620.1
Hypothetical protein.
 
     0.702
AKJ00800.1
Hypothetical protein.
  
  
 0.698
AKJ00199.1
Protein-L-isoaspartate O-methyltransferase.
   
    0.686
AKJ00329.1
Hypothetical protein.
       0.628
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.616
AKJ00331.1
Hypothetical protein.
 
     0.605
AKJ00328.1
D-alanine-D-alanine ligase.
       0.599
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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