STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00332.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
AKJ00333.1
Hypothetical protein.
       0.773
AKJ00334.1
Hypothetical protein.
       0.773
AKJ00335.1
Hypothetical protein.
       0.746
AKJ00954.1
General secretion pathway protein F.
  
  
 0.508
AKJ05518.1
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.508
AKJ05719.1
General secretion pathway protein F.
  
  
 0.508
AKJ06663.1
Type IV fimbrial assembly protein PilC.
  
  
 0.508
AKJ05040.1
DNA topoisomerase I.
  
  
 0.486
AKI98819.1
Type IV fimbrial assembly, ATPase PilB.
  
 
 0.474
AKJ00195.1
Type IV fimbrial assembly, ATPase PilB.
  
 
 0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.