STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00337.1Trypsin domain protein; Belongs to the peptidase S1B family. (260 aa)    
Predicted Functional Partners:
AKJ02846.1
Flagellar motor protein.
  
     0.601
AKJ01243.1
Hypothetical protein.
  
     0.591
AKI98918.1
Hypothetical protein.
  
     0.568
AKJ07382.1
Exonuclease SbcC.
  
    0.561
AKJ08419.1
Secreted trypsin-like serine protease.
 
   
 0.561
AKJ01591.1
Alg9 family protein mannosyltransferase.
  
     0.554
AKJ06930.1
Hypothetical protein.
  
     0.552
AKJ03902.1
Hypothetical protein.
  
     0.551
AKJ06212.1
Hypothetical protein.
 
     0.526
AKJ02914.1
Hypothetical protein.
  
     0.525
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.