STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00344.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
AKJ01657.1
Streptogrisin-C precursor.
  
     0.753
AKJ00679.1
Germacradienol/germacrene D synthase.
  
     0.676
AKJ07106.1
Germacradienol synthase.
  
     0.676
AKJ02550.1
Phage tail length tape-measure protein.
  
     0.578
AKJ05874.1
Hypothetical protein.
  
     0.568
AKJ02027.1
Hypothetical protein.
  
     0.531
AKJ02599.1
Putative acetyltransferase.
  
     0.528
AKJ00345.1
Hypothetical protein; Belongs to the UPF0312 family.
       0.522
AKJ02525.1
Hypothetical protein.
  
     0.516
AKJ03941.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.510
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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