Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00350.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
AKJ00349.1
Hypothetical protein.
       0.773
AKJ06871.1
Metallo-beta-lactamase family protein.
  
     0.572
AKJ00347.1
Adenylate cyclase.
       0.485
AKJ01403.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.463
AKJ00351.1
Hypothetical protein.
       0.440
AKJ00346.1
Hypothetical protein.
       0.439
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.425
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.403
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.403
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.403
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.