Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00351.1Hypothetical protein. (856 aa)    
Predicted Functional Partners:
AKJ02786.1
Isochorismatase.
  
    0.706
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.550
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.550
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.550
AKJ01545.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.523
AKJ03531.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.523
AKJ04229.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.523
AKJ03615.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.507
AKJ02443.1
Malonyl CoA-acyl carrier protein transacylase.
  
    0.501
AKJ06584.1
Non-ribosomal peptide synthetase.
  
    0.482
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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