STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00354.1Putative hydrolase. (235 aa)    
Predicted Functional Partners:
AKJ02935.1
Acetyltransferase.
  
     0.629
vgb
Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
     0.596
AKJ02475.1
Hypothetical protein.
  
     0.596
AKJ04802.1
Transcriptional regulator, TetR family.
  
     0.589
AKJ02357.1
Transcriptional regulator, TetR family.
  
     0.569
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKI98872.1
Alkaline phosphatase precursor.
  
     0.533
AKJ06880.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.517
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.