STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00359.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
AKJ03190.1
DNA gyrase subunit A.
  
     0.619
AKJ06371.1
Hypothetical protein.
  
     0.525
AKJ03584.1
Hypothetical protein.
  
     0.511
AKJ00360.1
Hypothetical protein.
       0.498
AKJ01860.1
Hypothetical protein.
  
     0.468
AKI99253.1
Glycosyl hydrolase, BNR repeat protein.
 
     0.427
AKJ05944.1
Hypothetical protein.
  
     0.420
AKI98628.1
Lactonizing lipase precursor.
  
     0.419
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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