STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00366.1Hypothetical protein. (647 aa)    
Predicted Functional Partners:
AKJ06436.1
Transcriptional regulator.
  
     0.668
AKJ00367.1
Cell surface protein.
 
     0.664
AKJ06403.1
Membrane protein.
  
     0.659
AKJ03146.1
Hypothetical protein.
  
     0.582
AKJ03145.1
Cellulose-binding domain protein.
  
     0.569
AKJ07927.1
ABC transporter, ATP-binding protein.
  
     0.557
AKJ01710.1
Hypothetical protein.
  
 
   0.545
AKJ06472.1
Adenylate cyclase.
  
     0.543
AKI98377.1
Hypothetical protein.
 
     0.533
AKJ05985.1
Tat.
  
     0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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