STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00367.1Cell surface protein. (450 aa)    
Predicted Functional Partners:
AKI99384.1
Hypothetical protein.
  
     0.735
AKJ03490.1
Hypothetical protein.
  
     0.722
AKJ00366.1
Hypothetical protein.
 
     0.664
AKJ06915.1
Arabinose efflux permease.
  
     0.586
AKJ00622.1
Hypothetical protein.
  
     0.578
AKJ03146.1
Hypothetical protein.
  
     0.576
AKJ07109.1
Hypothetical protein.
 
 
 0.572
AKJ03145.1
Cellulose-binding domain protein.
  
     0.570
AKJ06210.1
Hypothetical protein.
 
 
 0.566
AKJ08420.1
Hypothetical protein.
  
     0.550
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.