STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00378.1Hypothetical protein. (1318 aa)    
Predicted Functional Partners:
AKJ08119.1
Signal transduction histidine kinase CheA.
 
 
 0.625
AKJ08088.1
Hypothetical protein.
  
     0.601
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.591
AKJ02009.1
Signal transduction histidine kinase CheA.
  
 
 0.574
AKJ05979.1
Signal transduction histidine kinase CheA.
  
 
 0.574
AKJ07081.1
Signal transduction histidine kinase CheA.
  
 
 0.574
AKJ05792.1
Hypothetical protein.
  
     0.569
AKJ06465.1
Putative membrane protein.
  
     0.534
AKJ02124.1
High-affnity carbon uptake protein Hat/HatR.
  
 
   0.515
AKJ02426.1
DNA gyrase subunit A.
  
 
   0.509
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.