STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00378.1Hypothetical protein. (1318 aa)    
Predicted Functional Partners:
AKJ08119.1
Signal transduction histidine kinase CheA.
 
 
 0.680
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.674
AKJ02009.1
Signal transduction histidine kinase CheA.
  
 
 0.636
AKJ05979.1
Signal transduction histidine kinase CheA.
  
 
 0.636
AKJ07081.1
Signal transduction histidine kinase CheA.
  
 
 0.636
AKJ08088.1
Hypothetical protein.
  
     0.601
AKJ04404.1
Signal transduction histidine kinase CheA.
  
 
 0.596
AKJ05440.1
Signal transduction histidine kinase CheA.
  
 
 0.596
AKJ05792.1
Hypothetical protein.
  
     0.569
AKJ07084.1
Putative response regulator/chemotaxis protein CheW.
  
 
 0.564
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.