Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00380.1ABC transporter, permease protein, putative. (842 aa)    
Predicted Functional Partners:
AKJ00381.1
ABC transporter, ATP-binding protein.
 
 
 
 0.974
AKJ00382.1
Arylesterase precursor.
 
 
   0.948
AKJ00244.1
Hydroxyneurosporene synthase.
 
  
 0.669
AKJ07870.1
AttH component of AttEFGH ABC transport system.
 
  
 0.641
AKJ05889.1
Lipolytic enzyme, G-D-S-L precursor.
 
 
   0.559
AKJ00122.1
TonB-dependent receptor.
  
    0.533
msrQ
Membrane protein YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using th [...]
  
     0.453
AKJ07868.1
AttE component of AttEFGH ABC transport system.
 
  
 0.445
AKJ04969.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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