Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ00381.1ABC transporter, ATP-binding protein. (243 aa)    
Predicted Functional Partners:
AKJ00380.1
ABC transporter, permease protein, putative.
 
 
 
 0.974
AKJ00382.1
Arylesterase precursor.
 
 
   0.933
AKJ04512.1
Cell division protein FtsX.
     0.930
AKJ04513.1
Cell division protein FtsX.
     0.929
AKJ07314.1
Macrolide export ATP-binding/permease protein MacB.
     0.923
rplL
LSU ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.769
AKJ06434.1
ABC transporter permease protein.
 
 
 
 0.601
AKI99071.1
Hypothetical protein.
    
   0.591
AKJ05889.1
Lipolytic enzyme, G-D-S-L precursor.
   
   0.486
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.470
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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