STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00386.1Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (269 aa)    
Predicted Functional Partners:
AKJ00384.1
Cyclohexanone monooxygenase.
     
 0.782
AKJ00385.1
NHL repeat domain protein.
       0.773
AKJ00387.1
Hypothetical protein.
       0.752
AKJ08017.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.715
AKJ02929.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.698
AKJ04480.1
Enoyl-[acyl-carrier-protein] reductase.
  
 
   0.672
AKI99711.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.665
AKJ00383.1
Transcriptional regulator, TetR family.
       0.539
AKJ06175.1
Sorbitol dehydrogenase.
  
 
   0.514
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.427
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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