STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00413.1Putative phosphohydrolase. (372 aa)    
Predicted Functional Partners:
AKJ00414.1
Hypothetical protein.
 
     0.940
AKJ00412.1
Cytochrome c551 peroxidase.
 
    0.859
AKJ04783.1
Hypothetical protein.
  
     0.604
AKJ07037.1
LYCV glycosyl hydrolase.
  
     0.564
AKJ02790.1
TonB-dependent receptor.
 
     0.563
AKI99904.1
Putative outer membrane protein.
  
     0.541
AKJ04091.1
Protein ImpG/VasA.
  
     0.539
AKJ07688.1
Hypothetical protein.
  
     0.520
AKI98993.1
Putative DNA-binding regulatory protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.519
AKJ04095.1
Hypothetical protein.
  
     0.502
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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