STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00414.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AKJ00413.1
Putative phosphohydrolase.
 
     0.940
AKJ00412.1
Cytochrome c551 peroxidase.
 
  
 0.847
AKI99432.1
Hypothetical protein.
  
     0.691
AKJ04783.1
Hypothetical protein.
  
     0.685
AKI99904.1
Putative outer membrane protein.
  
     0.681
AKI99038.1
Fatty acid desaturase family protein.
  
     0.663
AKJ07688.1
Hypothetical protein.
  
     0.647
AKI99034.1
Fatty acid desaturase family protein.
  
     0.638
AKJ08362.1
Hypothetical protein.
  
     0.613
AKJ07109.1
Hypothetical protein.
  
    0.597
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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