STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00415.1Hypothetical protein. (215 aa)    
Predicted Functional Partners:
AKI98682.1
Hypothetical protein.
  
     0.765
AKJ07829.1
Hypothetical protein.
  
 
   0.741
AKJ06614.1
Hypothetical protein.
  
     0.595
AKJ00774.1
Hypothetical protein.
  
     0.575
AKJ04505.1
Hypothetical protein.
  
     0.561
AKJ00230.1
Putative lipoprotein.
  
     0.547
AKJ02499.1
Vibriolysin, extracellular zinc protease.
  
     0.534
AKJ08261.1
BNR repeat domain protein.
  
     0.531
AKJ00391.1
Dihydrosphingosine delta-4 desaturase.
  
     0.527
AKI98920.1
Hypothetical protein.
  
     0.526
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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