STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00418.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
AKJ00419.1
Transcriptional regulator, AraC family.
 
     0.789
AKJ02158.1
DifB protein.
  
     0.616
AKI99188.1
Acetyltransferase, GNAT family.
  
     0.544
AKI99165.1
Lignostilbene-alpha,beta-dioxygenase.
  
     0.497
AKI99277.1
Hypothetical protein.
  
   0.490
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.471
AKI99104.1
Alkaline phosphatase.
  
     0.434
AKJ04621.1
Monooxygenase, flavin-binding family.
  
    0.429
AKJ03257.1
Adventurous gliding motility protein K.
  
     0.426
AKJ03329.1
Rieske 2Fe-2S family protein.
 
    0.426
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.