Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00421.1Diguanylate cyclase/phosphodiesterase. (544 aa)    
Predicted Functional Partners:
AKJ03558.1
Two-component hybrid sensor and regulator.
  
 
   0.733
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.590
AKJ00420.1
Hypothetical protein.
       0.572
AKJ04547.1
Diguanylate cyclase/phosphodiesterase.
  
 
   0.536
AKI99219.1
Sensor histidine kinase/response regulator.
 
 
 
 0.529
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.510
AKJ02703.1
Adenylate cyclase.
 
 
 
 0.489
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
 
 0.488
AKJ05671.1
Multi-sensor hybrid histidine kinase.
  
 
   0.481
AKJ02023.1
PAS/PAC domain protein.
 
 
 0.475
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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