STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00423.1Fumarylacetoacetate hydrolase family protein. (327 aa)    
Predicted Functional Partners:
AKJ04618.1
Fumarylacetoacetase.
  
  
 
0.905
AKJ07304.1
Fumarylacetoacetate hydrolase family protein.
  
  
 
0.905
AKJ03416.1
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.839
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.839
AKJ03417.1
Succinate dehydrogenase iron-sulfur protein.
  
 
  0.811
AKI99579.1
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.806
AKJ00631.1
Succinate dehydrogenase cytochrome b558 subunit.
   
 
  0.804
AKJ07303.1
Maleylacetoacetate isomerase.
  
 0.782
AKJ04616.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.781
AKJ00426.1
Glyoxalase family protein.
 
   
 0.669
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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