Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00426.1Glyoxalase family protein. (317 aa)    
Predicted Functional Partners:
AKJ00427.1
Ferredoxin, 2Fe-2S.
 
  
 0.992
AKJ00425.1
Hypothetical protein.
 
     0.935
AKJ00428.1
Salicylate hydroxylase.
 
   
 0.918
AKJ00424.1
Nodulation protein D; Belongs to the LysR transcriptional regulatory family.
 
     0.840
AKJ00422.1
Metal-dependent hydrolase.
 
     0.786
AKJ00423.1
Fumarylacetoacetate hydrolase family protein.
 
   
 0.672
nuoI
NADH-ubiquinone oxidoreductase chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.548
AKJ07304.1
Fumarylacetoacetate hydrolase family protein.
 
   
 0.537
AKI99388.1
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB.
  
   
 0.532
birA
Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.524
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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