STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00426.1Glyoxalase family protein. (317 aa)    
Predicted Functional Partners:
AKJ00425.1
Hypothetical protein.
 
     0.935
AKJ00427.1
Ferredoxin, 2Fe-2S.
 
   
 0.931
AKJ00428.1
Salicylate hydroxylase.
 
   
 0.920
AKJ00424.1
Nodulation protein D; Belongs to the LysR transcriptional regulatory family.
 
     0.840
AKJ00422.1
Metal-dependent hydrolase.
 
   
 0.795
AKJ00423.1
Fumarylacetoacetate hydrolase family protein.
 
   
 0.669
AKI99388.1
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB.
  
   
 0.538
nuoI
NADH-ubiquinone oxidoreductase chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.537
AKJ07304.1
Fumarylacetoacetate hydrolase family protein.
 
   
 0.532
AKJ00429.1
Putative ATP-dependent DNA helicase.
 
     0.515
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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