Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AKJ00427.1Ferredoxin, 2Fe-2S. (113 aa)    
Predicted Functional Partners:
AKJ00426.1
Glyoxalase family protein.
 
  
 0.992
AKJ00425.1
Hypothetical protein.
 
    0.909
AKJ01108.1
Beta-glucosidase.
     
  0.900
AKJ01212.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
     
  0.900
AKJ01851.1
Beta-glucosidase.
     
  0.900
AKJ02832.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
AKJ07094.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
     
  0.900
AKJ07574.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
AKJ00428.1
Salicylate hydroxylase.
 
   
 0.829
AKJ00424.1
Nodulation protein D; Belongs to the LysR transcriptional regulatory family.
 
     0.637
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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