Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ00438.1Extracellular serine protease; Belongs to the peptidase S8 family. (817 aa)    
Predicted Functional Partners:
AKJ08412.1
Vibriolysin, extracellular zinc protease.
 
 0.810
AKJ07132.1
Protease precursor.
  
     0.774
AKI98435.1
Serine peptidase.
  
     0.762
AKJ00432.1
Glycerol-3-phosphate transport-related protein GlpU.
       0.567
AKJ00433.1
Glycerol-3-phosphate ABC transporter, permease protein UgpE.
       0.567
AKJ00434.1
Glycerol-3-phosphate ABC transporter, permease protein UgpA.
       0.567
AKJ00435.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
       0.567
AKJ00436.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
       0.567
AKJ00437.1
Hypothetical protein.
       0.567
AKJ00431.1
Glycerol-3-phosphate ABC transporter, permease protein UgpA.
       0.515
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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