Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00440.1Phytochrome, two-component sensor histidine kinase. (757 aa)    
Predicted Functional Partners:
AKJ00439.1
Bacteriophytochrome heme oxygenase BphO.
 
     0.939
AKJ01381.1
Phytochrome, two-component sensor histidine kinase.
  
  
0.912
AKJ00441.1
Two-component system response regulator.
 
 
   0.879
AKJ00442.1
Tetratricopeptide repeat family.
 
   0.839
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ01382.1
Two-component system response regulator.
  
   0.618
AKJ03155.1
FHA domain/GGDEF domain protein.
 
 
   0.580
AKI99757.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.557
AKJ04766.1
Circadian input kinase A.
 
 
   0.519
AKJ03441.1
DNA topoisomerase IB.
  
     0.510
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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