STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00440.1Phytochrome, two-component sensor histidine kinase. (757 aa)    
Predicted Functional Partners:
AKJ00439.1
Bacteriophytochrome heme oxygenase BphO.
 
     0.939
AKJ01381.1
Phytochrome, two-component sensor histidine kinase.
  
  
0.911
AKJ00441.1
Two-component system response regulator.
 
 
   0.883
AKJ00442.1
Tetratricopeptide repeat family.
 
   0.845
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ01382.1
Two-component system response regulator.
  
   0.628
AKI99786.1
Chemotaxis protein methyltransferase CheR.
 
 0.608
AKJ03155.1
FHA domain/GGDEF domain protein.
 
 
   0.586
AKI99757.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.557
AKJ04766.1
Circadian input kinase A.
 
   0.532
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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