Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00441.1Two-component system response regulator. (146 aa)    
Predicted Functional Partners:
AKJ00440.1
Phytochrome, two-component sensor histidine kinase.
 
 
   0.879
AKJ00442.1
Tetratricopeptide repeat family.
   
 
 0.837
AKI99839.1
Phytochrome, two-component sensor histidine kinase.
 
 
 0.802
AKJ00124.1
Phytochrome, two-component sensor histidine kinase.
 
 
 0.802
AKJ04546.1
Phytochrome, two-component sensor histidine kinase.
 
 
 0.787
AKJ00439.1
Bacteriophytochrome heme oxygenase BphO.
       0.773
AKJ06986.1
Phytochrome, two-component sensor histidine kinase.
 
   
 0.767
AKJ02167.1
Phytochrome, two-component sensor histidine kinase.
 
   
 0.763
AKJ03756.1
Phytochrome, two-component sensor histidine kinase.
 
   
 0.760
AKJ02952.1
Phytochrome, two-component sensor histidine kinase.
 
   
 0.757
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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