Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ00460.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AKI99917.1
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA.
 
    0.637
AKI98557.1
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone.
 
  
 0.612
ctaB
Heme O synthase, protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
    0.565
AKJ05276.1
Hypothetical protein.
  
     0.549
AKJ05958.1
Hypothetical protein.
  
    0.456
AKJ05273.1
Sodium iodide symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.427
AKJ07640.1
Hypothetical protein.
  
     0.427
AKJ00462.1
Hypothetical protein.
       0.416
AKJ01635.1
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone.
 
  
 0.414
AKJ00464.1
Tat.
 
     0.410
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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