STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00475.1Flagellar motor rotation protein MotB. (281 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
 
  
 0.925
AKJ05826.1
Flagellum-specific ATP synthase FliI.
 
  
 0.818
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
  
 0.784
AKJ05818.1
Flagellar biosynthesis protein FlhB.
 
  
 0.773
AKJ06422.1
Flagellar biosynthesis protein FlhB.
 
  
 0.756
AKJ02947.1
Outer membrane protein A precursor.
  
 
 0.752
AKJ05831.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
  
 0.748
AKJ08006.1
Signal transduction histidine kinase CheA.
 
  
 0.742
AKJ00072.1
Hypothetical protein.
  
  
 0.737
AKJ02477.1
Internalin, putative.
  
 
 0.732
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.