STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00485.1Hypothetical protein. (520 aa)    
Predicted Functional Partners:
AKJ00487.1
Glycosyl transferase, family 2.
 
     0.866
AKJ00486.1
Nitrogen regulatory protein P-II.
       0.773
AKJ02914.1
Hypothetical protein.
  
     0.769
AKJ00489.1
Hypothetical protein.
       0.768
AKJ06403.1
Membrane protein.
  
     0.764
AKJ01584.1
Hypothetical protein.
  
     0.762
AKJ01264.1
Hypothetical protein.
  
     0.761
AKJ04524.1
Hypothetical protein.
  
     0.758
AKJ07382.1
Exonuclease SbcC.
  
     0.757
AKI99432.1
Hypothetical protein.
  
     0.756
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.