STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00489.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
AKJ00485.1
Hypothetical protein.
       0.768
AKJ00486.1
Nitrogen regulatory protein P-II.
       0.768
AKJ00487.1
Glycosyl transferase, family 2.
       0.768
AKJ00488.1
Capsular exopolysaccharide family protein.
       0.572
AKJ00490.1
Glycosyltransferase.
       0.564
AKJ00491.1
Hypothetical protein.
       0.564
AKJ00492.1
Exopolysaccharide production protein ExoZ.
       0.564
AKJ00493.1
Glycosyltransferase.
       0.444
AKJ00494.1
Glycosyltransferase.
       0.444
AKJ00484.1
Hypothetical protein.
       0.423
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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