Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AKJ00490.1Glycosyltransferase. (379 aa)    
Predicted Functional Partners:
AKJ00493.1
Glycosyltransferase.
 
   
 0.886
AKJ00488.1
Capsular exopolysaccharide family protein.
  
  
 0.821
AKJ00492.1
Exopolysaccharide production protein ExoZ.
     
 0.775
AKJ00491.1
Hypothetical protein.
       0.773
AKJ00497.1
Glycosyl transferase, group 1.
 
   
 0.769
AKJ07193.1
Glycosyltransferase.
 
  
 0.738
AKJ00494.1
Glycosyltransferase.
 
    
0.704
AKJ02723.1
Glycosyltransferase.
  
     0.666
AKJ06631.1
Glycosyl transferase, group 1.
 
     0.629
AKJ02718.1
Teichoic acid export ATP-binding protein TagH.
 
 0.603
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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