STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00492.1Exopolysaccharide production protein ExoZ. (377 aa)    
Predicted Functional Partners:
AKJ00488.1
Capsular exopolysaccharide family protein.
 
   
 0.856
AKJ00490.1
Glycosyltransferase.
  
  
 0.776
AKJ00491.1
Hypothetical protein.
       0.773
AKJ01063.1
Acyltransferase family protein.
  
     0.674
AKJ07646.1
Acyltransferase 3.
  
     0.672
AKJ00493.1
Glycosyltransferase.
  
  
 0.599
AKJ00494.1
Glycosyltransferase.
  
  
 0.599
AKJ00487.1
Glycosyl transferase, family 2.
       0.565
AKJ00489.1
Hypothetical protein.
       0.564
AKJ00485.1
Hypothetical protein.
       0.561
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.