STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00494.1Glycosyltransferase. (392 aa)    
Predicted Functional Partners:
AKJ00493.1
Glycosyltransferase.
 
     0.941
AKJ00505.1
Putative glycosyl transferase.
  
     0.757
AKJ05134.1
Glycosyltransferase.
 
     0.738
AKI99077.1
Glycosyltransferase.
  
     0.726
AKJ00490.1
Glycosyltransferase.
 
    
0.705
AKJ00488.1
Capsular exopolysaccharide family protein.
  
  
 0.693
AKJ00513.1
UDP-glucose 6-dehydrogenase.
 
  
 0.629
AKJ01914.1
Glycosyl transferase, group 1.
  
     0.614
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.603
AKJ00492.1
Exopolysaccharide production protein ExoZ.
  
  
 0.599
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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