Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ00515.1High-affnity carbon uptake protein Hat/HatR. (1199 aa)    
Predicted Functional Partners:
AKJ00514.1
Glutamate synthase [NADPH] large chain.
       0.773
AKJ06284.1
TPR repeat protein.
  
 
 0.736
AKJ00725.1
Kinesin light chain-like protein.
 
 
 0.716
AKJ00818.1
Kinesin light chain-like protein.
 
 
 0.711
AKI99006.1
TPR repeat protein.
  
 
 0.670
AKJ01185.1
DNA recombination protein RmuC.
 
 
 0.662
AKJ05110.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.657
AKJ04477.1
Adenylate cyclase.
  
     0.655
AKJ05293.1
Hypothetical protein.
  
     0.645
AKJ00537.1
TPR repeat protein.
  
     0.642
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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