STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00517.1Hypothetical protein. (483 aa)    
Predicted Functional Partners:
AKJ00518.1
Hydrolase, alpha/beta hydrolase fold family.
      0.976
AKJ00519.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
  
    0.774
AKJ00516.1
Hypothetical protein.
       0.658
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ00520.1
Hypothetical protein.
       0.469
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.469
AKJ03529.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.441
AKJ07976.1
Hypothetical protein.
    
  0.427
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.