STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00518.1Hydrolase, alpha/beta hydrolase fold family. (289 aa)    
Predicted Functional Partners:
AKJ00517.1
Hypothetical protein.
      0.976
AKJ00519.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
    0.800
AKJ06459.1
Menaquinone biosynthesis related protein.
  
     0.758
AKJ00703.1
2-hydroxymuconic semialdehyde hydrolase.
  
     0.755
AKI99728.1
Putative hydrolase.
  
     0.746
AKI99915.1
Beta-ketoadipate enol-lactone hydrolase.
  
     0.735
AKJ06606.1
Hydrolase, alpha/beta fold family.
  
     0.702
AKJ00007.1
Epoxide hydrolase.
  
     0.692
AKI98808.1
Non-heme chloroperoxidase.
  
     0.679
AKJ04994.1
Epoxide hydrolase.
  
     0.676
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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