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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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[Homology]
Score
AKJ00529.1RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (504 aa)    
Predicted Functional Partners:
AKJ06661.1
Type IV fimbriae expression regulatory protein PilR.
 
  
 0.948
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 0.918
AKJ06662.1
Two-component sensor PilS.
    
 0.912
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
 
 0.903
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.895
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.889
AKJ04553.1
Response regulator of zinc sigma-54-dependent two-component system.
 
   
 0.800
AKJ01486.1
Formate hydrogenlyase transcriptional activator.
 
   
 0.790
AKI99385.1
Response regulator of zinc sigma-54-dependent two-component system.
 
   
 0.786
AKJ08436.1
Sigma-54 dependent transcriptional regulator, Fis family.
 
   
 0.786
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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