Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKJ00529.1 | AKJ01486.1 | AA314_02155 | AA314_03112 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Formate hydrogenlyase transcriptional activator. | 0.789 |
| AKJ00529.1 | AKJ04142.1 | AA314_02155 | AA314_05768 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulator of zinc sigma-54-dependent two-component system. | 0.784 |
| AKJ00529.1 | AKJ04244.1 | AA314_02155 | AA314_05870 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulatory protein. | 0.821 |
| AKJ00529.1 | AKJ04553.1 | AA314_02155 | AA314_06179 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulator of zinc sigma-54-dependent two-component system. | 0.798 |
| AKJ00529.1 | AKJ06661.1 | AA314_02155 | AA314_08287 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Type IV fimbriae expression regulatory protein PilR. | 0.948 |
| AKJ00529.1 | AKJ06662.1 | AA314_02155 | AA314_08288 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component sensor PilS. | 0.910 |
| AKJ00529.1 | rpoA | AA314_02155 | AA314_04757 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.954 |
| AKJ00529.1 | rpoB | AA314_02155 | AA314_06550 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.944 |
| AKJ00529.1 | rpoC | AA314_02155 | AA314_06549 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.951 |
| AKJ00529.1 | rpoZ | AA314_02155 | AA314_03953 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.929 |
| AKJ01486.1 | AKJ00529.1 | AA314_03112 | AA314_02155 | Formate hydrogenlyase transcriptional activator. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.789 |
| AKJ04142.1 | AKJ00529.1 | AA314_05768 | AA314_02155 | Response regulator of zinc sigma-54-dependent two-component system. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.784 |
| AKJ04244.1 | AKJ00529.1 | AA314_05870 | AA314_02155 | Response regulatory protein. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.821 |
| AKJ04553.1 | AKJ00529.1 | AA314_06179 | AA314_02155 | Response regulator of zinc sigma-54-dependent two-component system. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.798 |
| AKJ06661.1 | AKJ00529.1 | AA314_08287 | AA314_02155 | Type IV fimbriae expression regulatory protein PilR. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.948 |
| AKJ06661.1 | AKJ06662.1 | AA314_08287 | AA314_08288 | Type IV fimbriae expression regulatory protein PilR. | Two-component sensor PilS. | 0.978 |
| AKJ06662.1 | AKJ00529.1 | AA314_08288 | AA314_02155 | Two-component sensor PilS. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.910 |
| AKJ06662.1 | AKJ06661.1 | AA314_08288 | AA314_08287 | Two-component sensor PilS. | Type IV fimbriae expression regulatory protein PilR. | 0.978 |
| rpoA | AKJ00529.1 | AA314_04757 | AA314_02155 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.954 |
| rpoA | rpoB | AA314_04757 | AA314_06550 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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