Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ00530.1ErfK/YbiS/YcfS/YnhG family protein. (296 aa)    
Predicted Functional Partners:
AKJ00531.1
Glycosyl transferase, group 1 family protein.
     
 0.676
AKJ00532.1
Putative oxidoreductase YncB.
  
    0.580
AKJ07382.1
Exonuclease SbcC.
 
     0.532
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
 
     0.521
AKJ00061.1
Hypothetical protein.
  
   
 0.505
AKJ02968.1
Transcriptional regulator, LuxR family protein.
  
     0.492
AKJ02846.1
Flagellar motor protein.
 
     0.491
AKJ02914.1
Hypothetical protein.
 
     0.486
AKJ00466.1
RTX toxin.
 
     0.482
AKJ01243.1
Hypothetical protein.
 
     0.478
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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