STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00586.1AknN. (733 aa)    
Predicted Functional Partners:
AKJ00585.1
BarH.
 
     0.842
AKJ05788.1
Hypothetical protein.
 
  
 0.610
AKI98888.1
Nitroreductase family protein.
  
  
 0.582
AKJ04966.1
Lanthionine biosynthesis protein LanB.
  
  
 0.582
AKJ05880.1
Hypothetical protein.
 
  
 0.558
AKJ00587.1
Hypothetical protein.
       0.536
AKJ08037.1
Acyl carrier protein.
  
     0.524
AKI98422.1
Putative metal-dependent membrane protease.
  
  
 0.507
AKI99634.1
CAAX amino terminal protease family protein.
  
  
 0.507
AKJ03085.1
CAAX amino terminal protease family protein.
  
  
 0.507
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.