Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00598.1 | AKJ00599.1 | AA314_02224 | AA314_02225 | Hypothetical protein. | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
AKJ00598.1 | AKJ00600.1 | AA314_02224 | AA314_02226 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AKJ00598.1 | AKJ00601.1 | AA314_02224 | AA314_02227 | Hypothetical protein. | Peptidase C14 caspase catalytic subunit p20. | 0.768 |
AKJ00599.1 | AKJ00598.1 | AA314_02225 | AA314_02224 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
AKJ00599.1 | AKJ00600.1 | AA314_02225 | AA314_02226 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.829 |
AKJ00599.1 | AKJ00601.1 | AA314_02225 | AA314_02227 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | Peptidase C14 caspase catalytic subunit p20. | 0.780 |
AKJ00599.1 | AKJ01095.1 | AA314_02225 | AA314_02721 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.716 |
AKJ00599.1 | AKJ02577.1 | AA314_02225 | AA314_04203 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. | 0.716 |
AKJ00599.1 | AKJ02675.1 | AA314_02225 | AA314_04301 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.724 |
AKJ00599.1 | AKJ05731.1 | AA314_02225 | AA314_07357 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.708 |
AKJ00599.1 | AKJ05885.1 | AA314_02225 | AA314_07511 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.715 |
AKJ00599.1 | AKJ06948.1 | AA314_02225 | AA314_08574 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.708 |
AKJ00599.1 | AKJ07856.1 | AA314_02225 | AA314_09482 | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.726 |
AKJ00600.1 | AKJ00598.1 | AA314_02226 | AA314_02224 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AKJ00600.1 | AKJ00599.1 | AA314_02226 | AA314_02225 | Hypothetical protein. | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | 0.829 |
AKJ00600.1 | AKJ00601.1 | AA314_02226 | AA314_02227 | Hypothetical protein. | Peptidase C14 caspase catalytic subunit p20. | 0.768 |
AKJ00601.1 | AKJ00598.1 | AA314_02227 | AA314_02224 | Peptidase C14 caspase catalytic subunit p20. | Hypothetical protein. | 0.768 |
AKJ00601.1 | AKJ00599.1 | AA314_02227 | AA314_02225 | Peptidase C14 caspase catalytic subunit p20. | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | 0.780 |
AKJ00601.1 | AKJ00600.1 | AA314_02227 | AA314_02226 | Peptidase C14 caspase catalytic subunit p20. | Hypothetical protein. | 0.768 |
AKJ01095.1 | AKJ00599.1 | AA314_02721 | AA314_02225 | RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, group 3; Belongs to the sigma-70 factor family. ECF subfamily. | 0.716 |
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