Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ00605.1Transglycosylase associated protein. (89 aa)    
Predicted Functional Partners:
AKI98782.1
Dimethylhistidine N-methyltransferase.
   
    0.544
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.519
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.491
AKJ00604.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
       0.482
AKJ00932.1
Cys-tRNA(Pro) deacylase YbaK.
   
    0.450
AKJ06500.1
Two component transcriptional regulator, LytTR family.
   
    0.450
AKI98542.1
Lactoylglutathione lyase.
  
  
 0.406
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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