STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00622.1Hypothetical protein. (659 aa)    
Predicted Functional Partners:
AKI98981.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.766
AKJ03490.1
Hypothetical protein.
  
     0.756
AKI98734.1
Hypothetical protein.
  
     0.713
AKJ04463.1
Cell surface protein.
  
 
   0.665
AKI99022.1
Cell surface protein.
  
     0.657
AKJ04455.1
Hypothetical protein.
  
     0.632
AKJ00621.1
Hypothetical protein.
       0.584
AKJ00367.1
Cell surface protein.
  
     0.578
AKJ08257.1
Hypothetical protein.
  
     0.541
AKJ00620.1
Serine/threonine protein kinase.
  
    0.504
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.