Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00624.1Cell surface protein. (714 aa)    
Predicted Functional Partners:
AKI98981.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.754
AKJ03490.1
Hypothetical protein.
  
     0.700
AKI98734.1
Hypothetical protein.
  
     0.655
AKI99022.1
Cell surface protein.
  
     0.562
AKJ00623.1
Hypothetical protein.
       0.561
AKJ00625.1
Hypothetical protein.
 
    
0.538
AKJ04455.1
Hypothetical protein.
  
     0.490
AKJ04463.1
Cell surface protein.
  
 
   0.480
AKJ00367.1
Cell surface protein.
  
     0.457
AKJ08257.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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