STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00636.1Response regulator of zinc sigma-54-dependent two-component system. (478 aa)    
Predicted Functional Partners:
AKJ00635.1
Flagellar sensor histidine kinase FleS.
 
 
 
 0.893
AKJ00634.1
Selenocysteine-specific translation elongation factor.
       0.782
AKJ00529.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.734
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ00633.1
Phosphoribosyltransferase.
       0.711
AKJ08495.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.613
AKJ04336.1
Flagellar sensor histidine kinase FleS.
 
 
 0.561
AKJ00795.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.558
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.523
AKJ00632.1
Hsp33 family protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
       0.491
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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