STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00660.1Response regulator. (123 aa)    
Predicted Functional Partners:
AKJ02455.1
Response regulator.
  
 
   0.781
AKJ07066.1
Chemotaxis regulator.
  
 
   0.773
AKJ07085.1
Chemotaxis regulator.
  
 
   0.772
AKI99724.1
Chemotaxis regulator.
  
   0.768
AKI99723.1
Chemotaxis regulator.
  
 
   0.765
AKJ05442.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.759
AKI99288.1
Two-component response regulator.
  
 
   0.755
AKJ06898.1
Sensor histidine kinase.
  
    0.755
AKJ00404.1
DNA-binding response regulator, AraC family.
  
    0.751
AKJ07116.1
Chemotaxis regulator.
  
   0.750
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.