STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00679.1Germacradienol/germacrene D synthase. (774 aa)    
Predicted Functional Partners:
AKJ00680.1
cAMP-binding protein.
 
     0.950
AKJ00681.1
cAMP-binding protein.
 
     0.914
AKI98907.1
Phytoene synthase.
     
 0.906
AKJ07106.1
Germacradienol synthase.
  
  
 
0.904
AKJ03510.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.828
AKJ02692.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
   
 0.810
AKJ00239.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.806
AKJ03573.1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
     
 0.806
AKJ03731.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.806
AKJ00073.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
 0.803
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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