Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00687.1Cell division protein FtsK. (879 aa)    
Predicted Functional Partners:
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
 
  0.805
AKJ01603.1
TolA protein.
  
 
  0.781
AKJ05146.1
DNA gyrase subunit B.
  
 
  0.774
AKJ00731.1
FrgA.
  
     0.772
AKJ04705.1
Hypothetical protein.
  
 
 
 0.772
AKJ00779.1
Cell division protein FtsK.
 
 
 0.768
AKJ00756.1
DnaJ-class molecular chaperone CbpA.
  
    0.754
AKJ01954.1
Hypothetical protein.
  
   
 0.754
AKI99203.1
Putative asmA protein precursor.
  
     0.753
AKJ06643.1
TPR domain protein, putative.
  
   
 0.753
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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